Stem-loop pmi-mir-100

Accession

MI0025104

Description

Patiria miniata pmi-mir-100 precursor miRNA

Literature search

1 open access papers mention pmi-mir-100
(4 sentences)

Sequence

auaccucugguccgcccaAACCCGUAGAUCCGAACUUGUguuggcuucauauucacagguucgaauccacagguccugggcuggcuggaacucgcauccugccuacca
.....(((((((.(((((.(((.((.(((.((((((((((.............)))))))))).))).)).)))..))))).)))))))....(((...)))......

Structure

--------------auacc       c     -A   C  A   C          uuggc 
                   ucugguc gccca  ACC GU GAU CGAACUUGUg     u
                   ||||||| |||||  ||| || ||| ||||||||||     u
                   aggucgg cgggu  ugg ca cua gcuuggacac     c
accauccguccuacgcuca       u     cc   a  c   a          uuaua 

Annotation confidence Not enough data

Genome context

Unknown

Mature pmi-miR-100-5p

• Accession: MIMAT0032156
• Description: Patiria miniata pmi-miR-100-5p mature miRNA
• Sequence: 19 - AACCCGUAGAUCCGAACUUGU - 39
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374