Stem-loop oar-mir-99a

Accession

MI0025285

Description

Ovis aries oar-mir-99a precursor miRNA

Literature search

19 open access papers mention oar-mir-99a
(29 sentences)

Sequence

13157522 reads, 21096.0 reads per million, 143 experiments

cccauuggcauaAACCCGUAGAUCCGAUCUUGuggugaaguggaccgcaCAAGCUCGCUUCUAUGGGUCUGUgucagugug
..((((((((((.(((((((((..(((.((((((.((........)))))))).)))..))))))))).))))))))))..

Structure

cc          A         UC   U      g  aag 
  cauuggcaua ACCCGUAGA  CGA CUUGug ug   u
  |||||||||| |||||||||  ||| |||||| ||    
  gugacugUGU UGGGUAUCU  GCU GAACac gc   g
gu          C         UC   C      -  cag 

Annotation confidence High

Genome context

chr1: 138652383-138652463 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oar-mir-99a

Mature oar-miR-99a-5p

• Accession: MIMAT0030064
• Description: Ovis aries oar-miR-99a-5p mature miRNA
• Sequence: 13 - AACCCGUAGAUCCGAUCUUG - 32
• Evidence: experimental ; cloned [1]

Mature oar-miR-99a-3p

• Accession: MIMAT0052543
• Description: Ovis aries oar-miR-99a-3p mature miRNA
• Sequence: 50 - CAAGCUCGCUUCUAUGGGUCUGU - 72
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23269700
   MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
   "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
   "Physiol Genomics (2013) 45:151-161