miRBase entry: oar-mir-99a

Stem-loop oar-mir-99a

Accession

MI0025285

Description

Ovis aries oar-mir-99a precursor miRNA

Literature search

3 open access papers mention oar-mir-99a
(6 sentences)

Sequence

14999 reads, 2417 reads per million, 13 experiments

cccauuggcauaAACCCGUAGAUCCGAUCUUGuggugaaguggaccgcacaagcucgcuucuaugggucugugucagugug
..((((((((((.(((((((((..(((.((((((.((........)))))))).)))..))))))))).))))))))))..

Structure

cc          A         UC   U      g  aag 
  cauuggcaua ACCCGUAGA  CGA CUUGug ug   u
  |||||||||| |||||||||  ||| |||||| ||    
  gugacugugu uggguaucu  gcu gaacac gc   g
gu          c         uc   c      -  cag

Annotation confidence Not enough data

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Genome context

chr1: 138652383-138652463 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oar-mir-99a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oar-miR-99a

Accession	MIMAT0030064
Description	Ovis aries oar-miR-99a mature miRNA
Sequence	13 - AACCCGUAGAUCCGAUCUUG - 32
Evidence	experimental cloned [1]

References

PubMed ID: 23269700
MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
"Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
"Physiol Genomics (2013) 45:151-161