Stem-loop bdi-MIR5185i

Accession

MI0025313

Description

Brachypodium distachyon bdi-MIR5185i precursor miRNA

Literature search

1 open access papers mention bdi-MIR5185i
(1 sentences)

Sequence

7008 reads, 68.0 reads per million, 21 experiments

aaaguccugcUUCUAGUUCAUUUUUCAAAUCUucuauucaaaauuuugcuuagaauuugaauacgagaUUUGAGAAUUGAACUAGAAGCgggacuuucgcg
((((((((((((((((((((.((((((((((((.((((((((.(((.....))).)))))))).)))))))))))).))))))))))))))))))))....

Structure

----                    U            c        a   u 
    aaaguccugcUUCUAGUUCA UUUUCAAAUCUu uauucaaa uuu g
    |||||||||||||||||||| |||||||||||| |||||||| ||| c
    uuucagggCGAAGAUCAAGU AAGAGUUUagag auaaguuu aga u
gcgc                    U            c        a   u 

Annotation confidence High

Genome context

4: 35293520-35293620 [+]

Mature bdi-miR5185i-5p

• Accession: MIMAT0030121
• Description: Brachypodium distachyon bdi-miR5185i-5p mature miRNA
• Sequence: 11 - UUCUAGUUCAUUUUUCAAAUCU - 32
• Evidence: experimental ; Illumina [1]

Mature bdi-miR5185i-3p

• Accession: MIMAT0030122
• Description: Brachypodium distachyon bdi-miR5185i-3p mature miRNA
• Sequence: 69 - UUUGAGAAUUGAACUAGAAGC - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443