Stem-loop ppe-MIR7125

Accession

MI0026153

Description

Prunus persica ppe-MIR7125 precursor miRNA

Sequence

4505 reads, 1529.0 reads per million, 20 experiments

gugacgaagccaaagcuCUCAAAUGCAAGCUAGGUgcaacaaguucaaucuuuauguggcuggugccccuuauaagcauCGAACUUAUUGCAACUAGCUUucauuuuugagcuuuauaaugucac
((((((.....(((((((..(((((.(((((((.(((((.((((((.((.((((((.(((....)))...)))))).)).)))))).))))).))))))).)))))..)))))))....))))))

Structure

      aagcc       UC     C       G     c      a  c      --u   u 
gugacg     aaagcuC  AAAUG AAGCUAG Ugcaa aaguuc au uuuaug   ggc g
||||||     |||||||  ||||| ||||||| ||||| |||||| || ||||||   |||  
cacugu     uuucgag  uuuac UUCGAUC ACGUU UUCAAG ua gaauau   ccg g
      -aaua       uu     u       A     A      C  c      ucc   u 

Annotation confidence Medium

Genome context

chrG4: 6342132-6342256 [+]

Mature ppe-miR7125-5p

• Accession: MIMAT0031536
• Description: Prunus persica ppe-miR7125-5p mature miRNA
• Sequence: 18 - CUCAAAUGCAAGCUAGGU - 35
• Evidence: experimental ; Illumina [1]

Mature ppe-miR7125-3p

• Accession: MIMAT0031537
• Description: Prunus persica ppe-miR7125-3p mature miRNA
• Sequence: 80 - CGAACUUAUUGCAACUAGCUU - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149