Stem-loop bma-mir-232

Accession

MI0026290

Description

Brugia malayi bma-mir-232 precursor miRNA

Sequence

augagaauaaaugcaucugaaaugcgaauaaaugcaucuaagaugcgaauggacgcaucugaaaugcgaaUAAAUGCAUCUAAGAUGCGAAUGgacgcaucua
.....................(((((......(((((((.(((((((......(((((.....)))))......))))))).)))))))......)))))...

Structure

augagaauaaaugcaucugaa     aauaaa       a       aaugga     c 
                     augcg      ugcaucu agaugcg      cgcau u
                     |||||      ||||||| |||||||      ||||| g
                     uacgc      GCGUAGA UCUACGU      gcgua a
------------------auc     agGUAA       A       AAAUaa     a 

Annotation confidence Low

Comments

This microRNA was experimentally validated from deep sequencing libraries in the closely related species Brugia pahangi [1].

Genome context

Unknown

Mature bma-miR-232

• Accession: MIMAT0031741
• Description: Brugia malayi bma-miR-232 mature miRNA
• Sequence: 71 - UAAAUGCAUCUAAGAUGCGAAUG - 93
• Evidence: not_experimental

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4