Stem-loop cel-mir-8188

Accession

MI0026819

Description

Caenorhabditis elegans cel-mir-8188 precursor miRNA

Sequence

692 reads, 4 reads per million, 9 experiments

AGGCAAGAUGUAGGCACGUaggcagucaggccucCAGUAGACACUUGCGAAAUAUGC
..(((((.(((..((..(.((((......)))))..))..)))))))).........

Structure

-------AG     A   AG  AC U    ag 
         GCAAG UGU  GC  G aggc  u
         ||||| |||  ||  | ||||   
         CGUUC ACA  UG  c uccg  c
CGUAUAAAG     -   GA  AC -    ga 

Annotation confidence Not enough data

Genome context

chrII: 11840444-11840500 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cel-mir-8188

Mature cel-miR-8188-5p

• Accession: MIMAT0032789
• Description: Caenorhabditis elegans cel-miR-8188-5p mature miRNA
• Sequence: 1 - AGGCAAGAUGUAGGCACGU - 19
• Evidence: experimental ; SOLiD [1]

Mature cel-miR-8188-3p

• Accession: MIMAT0032790
• Description: Caenorhabditis elegans cel-miR-8188-3p mature miRNA
• Sequence: 35 - CAGUAGACACUUGCGAAAUAUGC - 57
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260