Stem-loop cel-mir-2217b-2

Accession

MI0026845

Description

Caenorhabditis elegans cel-mir-2217b-2 precursor miRNA

Sequence

528 reads, 2.0 reads per million, 67 experiments

cAGAGUGGGCAGUCGGUGUCaaucugcaacaaaagcaguUUGACCCUUGUGCUUGUUUCGGc
..(((.(((((...((.(((((.((((.......)))).)))))))...)))))..)))...

Structure

-cA   -U     GUC  U     u    aa 
   GAG  GGGCA   GG GUCaa cugc  c
   |||  |||||   || ||||| ||||  a
   CUU  UUCGU   CC CAGUU gacg  a
cGG   UG     GUU  -     u    aa 

Annotation confidence Medium

Genome context

chrII: 13619493-13619554 [-]

Mature cel-miR-2217b-5p

• Accession: MIMAT0032841
• Description: Caenorhabditis elegans cel-miR-2217b-5p mature miRNA
• Sequence: 2 - AGAGUGGGCAGUCGGUGUC - 20
• Evidence: experimental ; Illumina [1]

Mature cel-miR-2217b-3p

• Accession: MIMAT0032840
• Description: Caenorhabditis elegans cel-miR-2217b-3p mature miRNA
• Sequence: 40 - UUGACCCUUGUGCUUGUUUCGG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260