Stem-loop ppc-mir-8256

Accession

MI0026917

Description

Pristionchus pacificus ppc-mir-8256 precursor miRNA

Sequence

UCAGUGACCAAGGGCGAGUGCAGCauuauugauaggcUGCUUUCCUUUCGGUGGCUGGGG
(((((.(((.((((.(((.(((((...........))))).))))))).))).)))))..

Structure

--     G   A    C   U     auua 
  UCAGU ACC AGGG GAG GCAGC    u
  ||||| ||| |||| ||| |||||    u
  GGUCG UGG UUUC CUU CGUcg    g
GG     G   C    -   U     gaua 

Annotation confidence Low

Genome context

ABKE03000012.1: 1896455-1896514 [-]

Mature ppc-miR-8256-5p

• Accession: MIMAT0032980
• Description: Pristionchus pacificus ppc-miR-8256-5p mature miRNA
• Sequence: 1 - UCAGUGACCAAGGGCGAGUGCAGC - 24
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature ppc-miR-8256-3p

• Accession: MIMAT0032981
• Description: Pristionchus pacificus ppc-miR-8256-3p mature miRNA
• Sequence: 38 - UGCUUUCCUUUCGGUGGCUGGGG - 60
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260