Stem-loop ppc-mir-8334

Accession

MI0027037

Description

Pristionchus pacificus ppc-mir-8334 precursor miRNA

Sequence

AGUGCAAUAAUCUCAGGUCGCAcugaauugaaaugcagCGACGAGAGACUGUCGCACUCU
(((((.(((.((((..(((((................)))))..)))).))).)))))..

Structure

--     A   A    AG     Acugaau 
  AGUGC AUA UCUC  GUCGC       u
  ||||| ||| ||||  |||||        
  UCACG UGU AGAG  CAGCg       g
UC     C   C    AG     acguaaa 

Annotation confidence Not enough data

Genome context

ABKE03000131.1: 505062-505121 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from ppc-mir-8334

Mature ppc-miR-8334-5p

• Accession: MIMAT0033212
• Description: Pristionchus pacificus ppc-miR-8334-5p mature miRNA
• Sequence: 1 - AGUGCAAUAAUCUCAGGUCGCA - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8334-3p

• Accession: MIMAT0033213
• Description: Pristionchus pacificus ppc-miR-8334-3p mature miRNA
• Sequence: 39 - CGACGAGAGACUGUCGCACUCU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260