Stem-loop str-mir-72

Accession

MI0027107

Description

Strongyloides ratti str-mir-72 precursor miRNA

Sequence

766209 reads, 13428.0 reads per million, 12 experiments

AGGCAAGAUGUUGGCAUAGCUGAUagucgaaaauuauucAGUUAUGCUAUAUGUUGCCAGA
.(((((.((((.(((((((((((((((.....)))).))))))))))))))).)))))...

Structure

--A     G    U           -    c 
   GGCAA AUGU GGCAUAGCUGA Uagu g
   ||||| |||| ||||||||||| |||| a
   CCGUU UAUA UCGUAUUGAcu auua a
AGA     G    -           u    a 

Annotation confidence High

Genome context

Sratti_scf00013_Chr00: 1687596-1687656 [+]

Mature str-miR-72-5p

• Accession: MIMAT0033346
• Description: Strongyloides ratti str-miR-72-5p mature miRNA
• Sequence: 1 - AGGCAAGAUGUUGGCAUAGCUGAU - 24
• Evidence: experimental ; Illumina [1]

Mature str-miR-72-3p

• Accession: MIMAT0033347
• Description: Strongyloides ratti str-miR-72-3p mature miRNA
• Sequence: 40 - AGUUAUGCUAUAUGUUGCCAGA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260