Stem-loop str-mir-8386

Accession

MI0027150

Description

Strongyloides ratti str-mir-8386 precursor miRNA

Sequence

CGGGUUUGUUACUUGUUGAAUUuaauaaaaauaaaaaUUCACCGGGUAGACAAACGCGCG
((.((((((((((((.(((((((...........))))))).))))).))))))).))..

Structure

--  G       -     U       aaua 
  CG GUUUGUU ACUUG UGAAUUu    a
  || ||||||| ||||| |||||||    a
  GC CAAACAG UGGGC ACUUaaa    a
GC  G       A     C       aaua 

Annotation confidence Not enough data

Genome context

Sratti_scf00001_Chr02: 3569973-3570032 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from str-mir-8386

Mature str-miR-8386-5p

• Accession: MIMAT0033432
• Description: Strongyloides ratti str-miR-8386-5p mature miRNA
• Sequence: 1 - CGGGUUUGUUACUUGUUGAAUU - 22
• Evidence: experimental ; Illumina [1]

Mature str-miR-8386-3p

• Accession: MIMAT0033433
• Description: Strongyloides ratti str-miR-8386-3p mature miRNA
• Sequence: 38 - UUCACCGGGUAGACAAACGCGCG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260