Stem-loop str-mir-2

Accession

MI0027171

Description

Strongyloides ratti str-mir-2 precursor miRNA

Sequence

UUCAAAAGACUGUGUUUCAGGAuauguaaauuaugUAUCACAGUUAUUUUGAAUCUG
((((((((((((((...((.(((......))).))...))))))).)))))))....

Structure

----       -       UUU  G   au 
    UUCAAAA GACUGUG   CA GAu  g
    ||||||| |||||||   || |||   
    AAGUUUU UUGACAC   gu uua  u
GUCU       A       UAU  a   aa 

Annotation confidence Low

Genome context

Sratti_scf00002_Chr01: 94599-94655 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from str-mir-2

Mature str-miR-2-5p

• Accession: MIMAT0033474
• Description: Strongyloides ratti str-miR-2-5p mature miRNA
• Sequence: 1 - UUCAAAAGACUGUGUUUCAGGA - 22
• Evidence: experimental ; Illumina [1]

Mature str-miR-2-3p

• Accession: MIMAT0033475
• Description: Strongyloides ratti str-miR-2-3p mature miRNA
• Sequence: 36 - UAUCACAGUUAUUUUGAAUCUG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260