Stem-loop pxy-mir-263

Accession

MI0027328

Description

Plutella xylostella pxy-mir-263 precursor miRNA

Literature search

2 open access papers mention pxy-mir-263
(8 sentences)

Sequence

309964 reads, 13756.0 reads per million, 31 experiments

cacucguacugacacaggcAAUGGCACUGGAAGAAUUCACGGGUuuuguaacuaccccCGUGGUCUCUUAGUGGCAUCUCuggugucgggcgauuc
...((((.(((((((.((..(((.((((((.(((..(((((((.............)))))))))).)))))).)))..)).)))))))))))...

Structure

cac    a       a  cA   G      A   AU       Uuuug 
   ucgu cugacac gg  AUG CACUGG AGA  UCACGGG     u
   |||| ||||||| ||  ||| |||||| |||  |||||||     a
   agcg ggcugug uC  UAC GUGAUU UCU  GGUGCcc     a
cuu    -       g  UC   G      C   --       ccauc 

Annotation confidence High

Genome context

scaffold_154: 418634-418729 [-]

Mature pxy-miR-263-5p

• Accession: MIMAT0058607
• Description: Plutella xylostella pxy-miR-263-5p mature miRNA
• Sequence: 20 - AAUGGCACUGGAAGAAUUCACGGGU - 44
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-263-3p

• Accession: MIMAT0033738
• Description: Plutella xylostella pxy-miR-263-3p mature miRNA
• Sequence: 59 - CGUGGUCUCUUAGUGGCAUCUC - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787