Stem-loop dvi-mir-956

Accession

MI0029252

Description

Drosophila virilis dvi-mir-956 precursor miRNA

Sequence

1517925 reads, 5620.0 reads per million, 38 experiments

gaucguuaucGUGUUUGGAAUGGUCUCGUUAGCUaacggaugaacauugaccaaagcgcaccuuacagcguaguguagUUUCGAGACCACUCUAAUCCAUUgcauc
..........(((.(((((.((((((((..(((((................((..((((........))))..))))))).)))))))).)))))..)))......

Structure

gaucguuauc   -U     A        UU     acggaugaacauugac  aa    acc 
          GUG  UUGGA UGGUCUCG  AGCUa                ca  gcgc   u
          |||  ||||| ||||||||  |||||                ||  ||||    
          UAC  AAUCU ACCAGAGC  UUgau                gu  ugcg   u
----cuacgU   CU     C        -U     ----------------  ga    aca 

Annotation confidence High

Genome context

scaffold_13049: 23989411-23989516 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dvi-mir-956

Mature dvi-miR-956-5p

• Accession: MIMAT0035576
• Description: Drosophila virilis dvi-miR-956-5p mature miRNA
• Sequence: 11 - GUGUUUGGAAUGGUCUCGUUAGCU - 34
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-956-3p

• Accession: MIMAT0035577
• Description: Drosophila virilis dvi-miR-956-3p mature miRNA
• Sequence: 79 - UUUCGAGACCACUCUAAUCCAUU - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372