miRBase entry: dvi-mir-956

Stem-loop dvi-mir-956

Accession

MI0029252

Description

Drosophila virilis dvi-mir-956 precursor miRNA

Sequence

gaucguuaucguguuuggaauggucucguuagcUAACGGAUGAACAUUGACCAAAGCgcaccuuacagcguaguguagUUUCGAGACCACUCUAAUCCAUUgcauc
..........(((.(((((.((((((((..(((((................((..((((........))))..))))))).)))))))).)))))..)))......

Structure

gaucguuauc   -u     a        uu     ACGGAUGAACAUUGAC  AA    acc 
          gug  uugga uggucucg  agcUA                CA  GCgc   u
          |||  ||||| ||||||||  |||||                ||  ||||    
          UAC  AAUCU ACCAGAGC  UUgau                gu  ugcg   u
----cuacgU   CU     C        -U     ----------------  ga    aca

Annotation confidence Not enough data

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Genome context

scaffold_13049: 23989411-23989516 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dvi-mir-956

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-956-5p

Accession	MIMAT0035576
Description	Drosophila virilis dvi-miR-956-5p mature miRNA
Sequence	34 - UAACGGAUGAACAUUGACCAAAGC - 57
Evidence	experimental Illumina [1]

Mature dvi-miR-956-3p

Accession	MIMAT0035577
Description	Drosophila virilis dvi-miR-956-3p mature miRNA
Sequence	79 - UUUCGAGACCACUCUAAUCCAUU - 101
Evidence	experimental Illumina [1]

References

PubMed ID: 24448446
Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
"Ninova M, Ronshaugen M, Griffiths-Jones S"
"RNA (2014) 20:360-372