Stem-loop bra-MIR9568

Accession

MI0029318

Description

Brassica rapa bra-MIR9568 precursor miRNA

Sequence

uucucuuagagcaugauuaaUGCGGAUAUCUUAGGAUGAGGUucuuaguguaauauaaaaaacauuuauuacuuaaaagcuuaaagaaucuuuuauaguacguuaaaaaccUCAUCGUAAGAGAUCUGCAUUaaucauauucuuagaucc
...(((.((((.(((((((((((((((.(((((.(((((((((.((((((((.(((((((....((((.............)))).....))))))).)))))))).))))))))).))))).))))))))))))))).)))).)))...

Structure

uuc   u    c               A     G         c        a       -aaca    uuacu 
   ucu agag augauuaaUGCGGAU UCUUA GAUGAGGUu uuagugua uauaaaa     uuua     u
   ||| |||| ||||||||||||||| ||||| ||||||||| |||||||| |||||||     ||||     a
   aga ucuu uacuaaUUACGUCUA AGAAU CUACUccaa aauugcau auauuuu     aaau     a
ccu   u    a               G     G         a        g       cuaag    ucgaa 

Annotation confidence Not enough data

Genome context

chrA3: 14094126-14094275 [+]

Mature bra-miR9568-5p

• Accession: MIMAT0035697
• Description: Brassica rapa bra-miR9568-5p mature miRNA
• Sequence: 21 - UGCGGAUAUCUUAGGAUGAGGU - 42
• Evidence: experimental ; Illumina [1]

Mature bra-miR9568-3p

• Accession: MIMAT0035698
• Description: Brassica rapa bra-miR9568-3p mature miRNA
• Sequence: 112 - UCAUCGUAAGAGAUCUGCAUU - 132
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24559317
   Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis
   Jiang J, Lv M, Liang Y, Ma Z, Cao J
   BMC Genomics (2014) 15:146