Stem-loop aca-mir-9577

Accession

MI0029366

Description

Anolis carolinensis aca-mir-9577 precursor miRNA

Sequence

cccuucuacacUGGCCCAAACUCUUAUGAAAUCaguauuuaaagccccaaUUUCAUGAGAAUUUGGUGCUCGugcaggcggc
.((.(((.(((.((((((((.(((((((((((.................))))))))))).))))).))).))).))).)).

Structure

c  u   a   U   -     C           Caguauu 
 cc ucu cac GGC CCAAA UCUUAUGAAAU       u
 || ||| ||| ||| ||||| |||||||||||       a
 gg gga guG UCG GGUUU AGAGUACUUUa       a
c  c   c   C   U     A           accccga 

Annotation confidence Not enough data

Genome context

chr5: 87965757-87965838 [-]

Mature aca-miR-9577-5p

• Accession: MIMAT0037588
• Description: Anolis carolinensis aca-miR-9577-5p mature miRNA
• Sequence: 12 - UGGCCCAAACUCUUAUGAAAUC - 33
• Evidence: experimental ; Illumina [1]

Mature aca-miR-9577-3p

• Accession: MIMAT0037589
• Description: Anolis carolinensis aca-miR-9577-3p mature miRNA
• Sequence: 51 - UUUCAUGAGAAUUUGGUGCUCG - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196