Stem-loop ami-mir-10b

Accession

MI0029664

Description

Alligator mississippiensis ami-mir-10b precursor miRNA

Sequence

cguugucuauauaUACCCUGUAGAACCGAAUUUGUgugguauucacauagucACAGAUUCGAUUCUAGGGGAAUauauggucgaugc
(((((.((((((((.((((.(((((.((((((((((.(.(((....))).))))))))))).))))))))).)))))))).))))).

Structure

-     u        A    G     C          u g   u 
 cguug cuauauaU CCCU UAGAA CGAAUUUGUg g uau c
 ||||| |||||||| |||| ||||| |||||||||| | |||  
 guagc gguauaUA GGGG AUCUU GCUUAGACAc u aua a
c     u        A    -     A          - g   c 

Annotation confidence Not enough data

Genome context

AKHW03006853.1: 6396776-6396862 [-]

Mature ami-miR-10b-5p

• Accession: MIMAT0038032
• Description: Alligator mississippiensis ami-miR-10b-5p mature miRNA
• Sequence: 14 - UACCCUGUAGAACCGAAUUUGU - 35
• Evidence: experimental ; Illumina [1]

Mature ami-miR-10b-3p

• Accession: MIMAT0038033
• Description: Alligator mississippiensis ami-miR-10b-3p mature miRNA
• Sequence: 53 - ACAGAUUCGAUUCUAGGGGAAU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196