miRBase entry: cli-mir-10c

Stem-loop cli-mir-10c


Accession
MI0029905
Description
Columba livia cli-mir-10c precursor miRNA


Sequence

ccccgucuccuauaugUACCCUGUAGACUCGAAUUUGugugagcgucucccagucaCAAAUUCGUCUCUAGGGGAAUAuaugggcgaugcca
...((((.(((((((((.((((.((((..((((((((((...((........))))))))))))..)))))))).))))))))).))))...

Structure
ccc    u         A    G    CU          uga  guc 
   cguc ccuauaugU CCCU UAGA  CGAAUUUGug   gc   u
   |||| ||||||||| |||| ||||  ||||||||||   ||    
   guag ggguauAUA GGGG AUCU  GCUUAAACac   ug   c
acc    c         A    -    CU          ---  acc 


Annotation confidence Not enough data
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Genome context
KB376284.1: 255100-255191 [+]

Database links

Mature cli-miR-10c-5p

Accession MIMAT0038408
Description Columba livia cli-miR-10c-5p mature miRNA
Sequence 17 - UACCCUGUAGACUCGAAUUUG - 37
Evidence experimental
Illumina [1]

Mature cli-miR-10c-3p

Accession MIMAT0038409
Description Columba livia cli-miR-10c-3p mature miRNA
Sequence 57 - CAAAUUCGUCUCUAGGGGAAUA - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196