Stem-loop cli-mir-125-1

Accession

MI0029956

Description

Columba livia cli-mir-125-1 precursor miRNA

Sequence

guugcgccccucucaaUCCCUGAGACCCUAACUUGUGAuguuuagcuuuuaaauccACGGGUUAGGCUCUUGGGAGCUgugaguugugcuuu
...((((..(((.((.((((.((((.(((((((((((..(((((.....))))).))))))))))).))))))))..)).)))..))))...

Structure

guu    cc   u  -a    U    C           Au     g 
   gcgc  cuc ca  UCCC GAGA CCUAACUUGUG  guuua c
   ||||  ||| ||  |||| |||| |||||||||||  ||||| u
   cgug  gag gU  AGGG UUCU GGAUUGGGCAc  uaaau u
uuu    uu   u  CG    -    C           -c     u 

Annotation confidence Not enough data

Genome context

KB375651.1: 846253-846344 [-]

Mature cli-miR-125-5p

• Accession: MIMAT0038496
• Description: Columba livia cli-miR-125-5p mature miRNA
• Sequence: 17 - UCCCUGAGACCCUAACUUGUGA - 38
• Evidence: experimental ; Illumina [1]

Mature cli-miR-125-3p

• Accession: MIMAT0038497
• Description: Columba livia cli-miR-125-3p mature miRNA
• Sequence: 57 - ACGGGUUAGGCUCUUGGGAGCU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196