Stem-loop cli-mir-125-2

Accession

MI0029957

Description

Columba livia cli-mir-125-2 precursor miRNA

Sequence

ggacuuuuccuagUCCCUGAGACCCUAACUUGUGAgguuuuuuagcaacaaucACAAGUCAGGCUCUUGGGACCUaggcggagggg
...((((.(((((((((.((((.(((.((((((((.(((.......)))..)))))))).))).)))))))).))))).))))...

Structure

gga    u     -    U    C   A        -g   uu 
   cuuu ccuag UCCC GAGA CCU ACUUGUGA  guu  u
   |||| ||||| |||| |||| ||| ||||||||  |||  u
   gagg ggaUC AGGG UUCU GGA UGAACAcu  caa  a
ggg    c     C    -    C   C        aa   cg 

Annotation confidence Not enough data

Genome context

KB375804.1: 18463414-18463499 [+]

Mature cli-miR-125-5p

• Accession: MIMAT0038496
• Description: Columba livia cli-miR-125-5p mature miRNA
• Sequence: 14 - UCCCUGAGACCCUAACUUGUGA - 35
• Evidence: experimental ; Illumina [1]

Mature cli-miR-125-2-3p

• Accession: MIMAT0038498
• Description: Columba livia cli-miR-125-2-3p mature miRNA
• Sequence: 54 - ACAAGUCAGGCUCUUGGGACCU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196