Stem-loop cli-mir-9642

Accession

MI0030122

Description

Columba livia cli-mir-9642 precursor miRNA

Sequence

cgaccagagGUGAGAGCUCAGGUGCCUUCUCcaaauccuucugagcacggGACGGCGCCCUGACCUCUGUCCccucucggcag
...(((((((..((((.(((((((((.((((....((.....))....)))).)))).))))).))))....))))).))...

Structure

cga  -     --UG    C     -    U    caaa  c 
   cc agagG    AGAG UCAGG UGCC UCUC    uc u
   || |||||    |||| ||||| |||| ||||    || u
   gg ucucc    UCUC AGUCC GCGG AGgg    ag c
gac  c     CCUG    C     C    C    cacg  u 

Annotation confidence Not enough data

Genome context

KB376336.1: 218899-218981 [-]

Mature cli-miR-9642-5p

• Accession: MIMAT0038777
• Description: Columba livia cli-miR-9642-5p mature miRNA
• Sequence: 10 - GUGAGAGCUCAGGUGCCUUCUC - 31
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9642-3p

• Accession: MIMAT0038778
• Description: Columba livia cli-miR-9642-3p mature miRNA
• Sequence: 51 - GACGGCGCCCUGACCUCUGUCC - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196