Stem-loop pbv-mir-100

Accession

MI0030203

Description

Python bivittatus pbv-mir-100 precursor miRNA

Sequence

ugccaguugccacaAACCCGUAGAUCCGAACUUGUGcuccuauccuacaCAAGCUUGUAUCUAUAGGUAUGugucugcuuggcc
.((((((.(.((((.(((.((((((.(((.((((((...........)))))).))).)))))).))).)))).).)).)))).

Structure

u    -  u c    A   C      C   A      cucc 
 gcca gu g caca ACC GUAGAU CGA CUUGUG    u
 |||| || | |||| ||| |||||| ||| ||||||    a
 cggu cg c guGU UGG UAUCUA GUU GAACac    u
c    u  u u    A   A      U   C      aucc 

Annotation confidence Not enough data

Genome context

KE964379.1: 2496-2579 [+]

Mature pbv-miR-100-5p

• Accession: MIMAT0038899
• Description: Python bivittatus pbv-miR-100-5p mature miRNA
• Sequence: 15 - AACCCGUAGAUCCGAACUUGUG - 36
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-100-3p

• Accession: MIMAT0038900
• Description: Python bivittatus pbv-miR-100-3p mature miRNA
• Sequence: 50 - CAAGCUUGUAUCUAUAGGUAUG - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196