Stem-loop chi-mir-362

Accession

MI0030761

Description

Capra hircus chi-mir-362 precursor miRNA

Literature search

1 open access papers mention chi-mir-362
(1 sentences)

Sequence

gagccuucuugucugcucccccucucgAAUCCUUGGAACCUAGGUGUGAGUgcugcucuagugcAACACACCUAUUCAAGGAUUCaaagaggcugagc
..............((((..(((((.(((((((((((...((((((((.((((((...))))))..)))))))))))))))))))..)))))..))))

Structure

gagccuucuugucu    cc     -c           ACC        -A      c 
              gcuc  ccucu  gAAUCCUUGGA   UAGGUGUG  GUgcug  
              ||||  |||||  |||||||||||   ||||||||  |||||| u
              cgag  ggaga  CUUAGGAACUU   AUCCACAC  cgugau  
--------------    uc     aa           ---        AA      c 

Annotation confidence Not enough data

Genome context

chrX: 82604414-82604511 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from chi-mir-362

Mature chi-miR-362-5p

• Accession: MIMAT0036173
• Description: Capra hircus chi-miR-362-5p mature miRNA
• Sequence: 28 - AAUCCUUGGAACCUAGGUGUGAGU - 51
• Evidence: experimental ; Illumina [1]

Mature chi-miR-362-3p

• Accession: MIMAT0036174
• Description: Capra hircus chi-miR-362-3p mature miRNA
• Sequence: 65 - AACACACCUAUUCAAGGAUUC - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40