Stem-loop chi-mir-432

Accession

MI0030792

Description

Capra hircus chi-mir-432 precursor miRNA

Literature search

3 open access papers mention chi-mir-432
(10 sentences)

Sequence

gcaugacuccuccaagUCUUGGAGUAGGUCAUUGGGUGGauccuuuauuucccuaugugggccACUGGAUGGCUCCUCCAUGUCUuggcg
...........(((((.(.(((((..(((((((.(((((.(((..(((......))).)))))))).))))))).))))).).)))))..

Structure

gcaugacuccu     U U     UA       G     a   uu   uu 
           ccaag C UGGAG  GGUCAUU GGUGG ucc  uau  c
           ||||| | |||||  ||||||| ||||| |||  |||   
           gguUC G ACCUC  UCGGUAG UCAcc ggg  gua  c
---------gc     U U     -C       G     -   -u   uc 

Annotation confidence Low

Genome context

chr21: 66966894-66966983 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from chi-mir-432

Mature chi-miR-432-5p

• Accession: MIMAT0036227
• Description: Capra hircus chi-miR-432-5p mature miRNA
• Sequence: 17 - UCUUGGAGUAGGUCAUUGGGUGG - 39
• Evidence: experimental ; Illumina [1]

Mature chi-miR-432-3p

• Accession: MIMAT0036228
• Description: Capra hircus chi-miR-432-3p mature miRNA
• Sequence: 64 - ACUGGAUGGCUCCUCCAUGUCU - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40