miRBase entry: chi-mir-532

Stem-loop chi-mir-532

Accession

MI0030818

Description

Capra hircus chi-mir-532 precursor miRNA

Sequence

gacuugcuuucucucuuaCAUGCCUUGAGUGUAGGACCGUuggcaucuuaauuacCCUCCCACACCCAAGGCUUGCaggagggccagccuuuuccucccuc
.....(((..(((((((.((.((((((.((((.(((..((.............))..))).)))).)))))).)).)))))))..))).............

Structure

--------gacuu   uu       a  U      A    A   CC  uggca 
             gcu  cucucuu CA GCCUUG GUGU GGA  GU     u
             |||  ||||||| || |||||| |||| |||  ||     c
             cga  gggagga GU CGGAAC CACA CCU  ca     u
cucccuccuuuuc   cc       C  U      C    C   CC  uuaau

Annotation confidence Not enough data

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Genome context

chrX: 82620208-82620308 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from chi-mir-532

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature chi-miR-532-5p

Accession	MIMAT0036270
Description	Capra hircus chi-miR-532-5p mature miRNA
Sequence	19 - CAUGCCUUGAGUGUAGGACCGU - 40
Evidence	experimental Illumina [1]

Mature chi-miR-532-3p

Accession	MIMAT0036271
Description	Capra hircus chi-miR-532-3p mature miRNA
Sequence	56 - CCUCCCACACCCAAGGCUUGC - 76
Evidence	experimental Illumina [1]

References

PubMed ID: 23981187
Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
"Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
"Reprod Domest Anim (2014) 49:32-40