Stem-loop chi-mir-767

Accession

MI0030834

Description

Capra hircus chi-mir-767 precursor miRNA

Literature search

3 open access papers mention chi-mir-767
(46 sentences)

Sequence

7467 reads, 22.0 reads per million, 36 experiments

uuuguauuauagguuuuugcucgUGCACCAUGGUUGUCUGAGCAUgcagccugcuugUCUGCUCAUACCCCAUGGUUcccgagcaggaaccgucacugcuuacug
...(((.....((((((((((((.(.(((((((..((.((((((.((((.....)))).)))))).)).))))))).).)))))))))))).....)))......

Structure

---uuu   uuaua            U C       UU  C      U    c 
      gua     gguuuuugcucg G ACCAUGG  GU UGAGCA gcag c
      |||     |||||||||||| | |||||||  || |||||| |||| u
      cgu     ccaaggacgagc c UGGUACC  CA ACUCGU Uguu g
gucauu   cacug            c U       -C  U      C    c 

Annotation confidence Medium

Genome context

chrX: 56904985-56905089 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from chi-mir-767

Mature chi-miR-767-5p

• Accession: MIMAT0036293
• Description: Capra hircus chi-miR-767-5p mature miRNA
• Sequence: 24 - UGCACCAUGGUUGUCUGAGCAU - 45
• Evidence: experimental ; Illumina [1]

Mature chi-miR-767-3p

• Accession: MIMAT0058983
• Description: Capra hircus chi-miR-767-3p mature miRNA
• Sequence: 58 - UCUGCUCAUACCCCAUGGUU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40