Stem-loop hpo-mir-228

Accession

MI0032686

Description

Heligmosomoides polygyrus hpo-mir-228 precursor miRNA

Sequence

AAUGGCACUGCAUGAAUUCACGGuuguuguuugggccGUGCAUCCAGUGGUUCCAUACC
.((((.(((((.((.((.(((((((........))))))).)).))))))).))))...

Structure

--A    C     A  A  U       guu 
   AUGG ACUGC UG AU CACGGuu   g
   |||| ||||| || || |||||||    
   UACC UGGUG AC UA GUGccgg   u
CCA    U     -  C  C       guu 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_176574: 1579-1637 [-]

Mature hpo-miR-228-5p

• Accession: MIMAT0040458
• Description: Heligmosomoides polygyrus hpo-miR-228-5p mature miRNA
• Sequence: 1 - AAUGGCACUGCAUGAAUUCACGG - 23
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-228-3p

• Accession: MIMAT0040459
• Description: Heligmosomoides polygyrus hpo-miR-228-3p mature miRNA
• Sequence: 38 - GUGCAUCCAGUGGUUCCAUACC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488