Stem-loop hpo-mir-235

Accession

MI0032715

Description

Heligmosomoides polygyrus hpo-mir-235 precursor miRNA

Sequence

AGGCCUGGUCGUCUGCCAUGUUuggcaacgcgaaUAUUGCACUCGCCCCGGCCUGA
(((((.((.((..(((.(((((((......))))))).)))..)).)).)))))..

Structure

--     U  U  UC   C       gc 
  AGGCC GG CG  UGC AUGUUug  a
  ||||| || ||  ||| |||||||   
  UCCGG CC GC  ACG UAUaagc  a
AG     C  C  UC   U       gc 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_265859: 2343-2398 [-]

Mature hpo-miR-235-5p

• Accession: MIMAT0040516
• Description: Heligmosomoides polygyrus hpo-miR-235-5p mature miRNA
• Sequence: 1 - AGGCCUGGUCGUCUGCCAUGUU - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-235-3p

• Accession: MIMAT0040517
• Description: Heligmosomoides polygyrus hpo-miR-235-3p mature miRNA
• Sequence: 35 - UAUUGCACUCGCCCCGGCCUGA - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488