Stem-loop hpo-mir-10030

Accession

MI0032742

Description

Heligmosomoides polygyrus hpo-mir-10030 precursor miRNA

Sequence

GAUAAUAAACACCACUUGCAGCAGUggcugccugccacgcuuccacGUUGUGGUGUUUACGGUUGUCGG
(((((((((((((((..(((((.(((((.....)))))))).....)).)))))))))...))))))..

Structure

--      ---         UU  -----   A     u 
  GAUAAU   AAACACCAC  GC     AGC GUggc g
  ||||||   |||||||||  ||     ||| ||||| c
  CUGUUG   UUUGUGGUG  UG     ucg caccg c
GG      GCA         -U  caccu   -     u 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_72767: 1261-1329 [-]

Mature hpo-miR-10030-5p

• Accession: MIMAT0040570
• Description: Heligmosomoides polygyrus hpo-miR-10030-5p mature miRNA
• Sequence: 1 - GAUAAUAAACACCACUUGCAGCAGU - 25
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10030-3p

• Accession: MIMAT0040571
• Description: Heligmosomoides polygyrus hpo-miR-10030-3p mature miRNA
• Sequence: 47 - GUUGUGGUGUUUACGGUUGUCGG - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488