Stem-loop hpo-mir-5932

Accession

MI0032778

Description

Heligmosomoides polygyrus hpo-mir-5932 precursor miRNA

Sequence

CUUCUAACCAUAGCCAAAAUCGgcgauacggcuugAUUUUGGUCGGUGGUUAGAGUCA
.((((((((((.((((((((((((......)).))))))))))..))))))))))...

Structure

--C          -A          -  ga 
   UUCUAACCAU  GCCAAAAUCG gc  u
   ||||||||||  |||||||||| ||   
   GAGAUUGGUG  UGGUUUUAgu cg  a
ACU          GC          u  gc 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_278211: 420-477 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from hpo-mir-5932

Mature hpo-miR-5932-5p

• Accession: MIMAT0040640
• Description: Heligmosomoides polygyrus hpo-miR-5932-5p mature miRNA
• Sequence: 1 - CUUCUAACCAUAGCCAAAAUCG - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-5932-3p

• Accession: MIMAT0040641
• Description: Heligmosomoides polygyrus hpo-miR-5932-3p mature miRNA
• Sequence: 36 - AUUUUGGUCGGUGGUUAGAGUCA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488