Stem-loop hpo-mir-10057

Accession

MI0032782

Description

Heligmosomoides polygyrus hpo-mir-10057 precursor miRNA

Sequence

guguuccaugcugACUGGUGAUCUCUGACCGGGCccaaagcgagcUCGUGUGCAGGUGUUUUCCAGUCAggaucgaucg
..(.((.((.((((((((.(((.(((((((((((.(.....).))))).)).)))).)))..)))))))).)).)).).

Structure

gu u  c  g        -U   C    -  -     c a 
  g uc au cugACUGG  GAU UCUG AC CGGGC c a
  | || || ||||||||  ||| |||| || ||||| | a
  c ag ua gACUGACC  UUG GGAC UG GCUcg g g
-g u  c  g        UU   U    G  U     a c 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_135458: 776-854 [-]

Mature hpo-miR-10057-5p

• Accession: MIMAT0040648
• Description: Heligmosomoides polygyrus hpo-miR-10057-5p mature miRNA
• Sequence: 14 - ACUGGUGAUCUCUGACCGGGC - 34
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10057-3p

• Accession: MIMAT0040649
• Description: Heligmosomoides polygyrus hpo-miR-10057-3p mature miRNA
• Sequence: 46 - UCGUGUGCAGGUGUUUUCCAGUCA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488