Stem-loop hpo-mir-10061

Accession

MI0032789

Description

Heligmosomoides polygyrus hpo-mir-10061 precursor miRNA

Sequence

GGUGCUUCGCGAUUCGGAACUGUauguacgucgguugggagaccuggucuuccuguaccgacggucguguuGUGAUUCCGAACGCUCUGCACGC
.((((...(((.((((((((..((((..(((((((.(((((((...)))))))...)))))))..))))..))...)))))))))...))))..

Structure

-G    UUC   A      ---  UG    ua       --u       c 
  GUGC   GCG UUCGGA   AC  Uaug  cgucggu   gggagac  
  ||||   ||| ||||||   ||  ||||  |||||||   ||||||| u
  CACG   CGC AAGCCU   UG  gugc  gcagcca   ccuucug  
CG    UCU   -      UAG  uu    ug       ugu       g 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_201256: 133-226 [+]

Mature hpo-miR-10061-5p

• Accession: MIMAT0040662
• Description: Heligmosomoides polygyrus hpo-miR-10061-5p mature miRNA
• Sequence: 1 - GGUGCUUCGCGAUUCGGAACUGU - 23
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10061-3p

• Accession: MIMAT0040663
• Description: Heligmosomoides polygyrus hpo-miR-10061-3p mature miRNA
• Sequence: 72 - GUGAUUCCGAACGCUCUGCACGC - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488