Stem-loop hpo-mir-10081

Accession

MI0032819

Description

Heligmosomoides polygyrus hpo-mir-10081 precursor miRNA

Sequence

CGAUCCUCCGUCUACACCUGUAgaauauguccuaCAGUGGUCGUCGGUGGAUGGGC
(.((((.(((.(.((..((((((........))))))..)).).))).)))).)..

Structure

-- G    U   U U  AC      aau 
  C AUCC CCG C AC  CUGUAg   a
  | |||| ||| | ||  ||||||    
  G UAGG GGC G UG  GACauc   u
CG G    U   U C  GU      cug 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_92106: 363-418 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from hpo-mir-10081

Mature hpo-miR-10081-5p

• Accession: MIMAT0040721
• Description: Heligmosomoides polygyrus hpo-miR-10081-5p mature miRNA
• Sequence: 1 - CGAUCCUCCGUCUACACCUGUA - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10081-3p

• Accession: MIMAT0040722
• Description: Heligmosomoides polygyrus hpo-miR-10081-3p mature miRNA
• Sequence: 35 - CAGUGGUCGUCGGUGGAUGGGC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488