Stem-loop hpo-mir-10087

Accession

MI0032827

Description

Heligmosomoides polygyrus hpo-mir-10087 precursor miRNA

Sequence

gcuguuuaccGCGAUUUGUGUGGUUUUGAUAGGgauaaccaaggugucccuuaaagguugccaAUUGAUACCCAGCAGAGUGGcauuagcu
((((....((((..(((((..(((.(((((..((.(((((((((....))))...))))))).))))).)))..)))))))))...)))).

Structure

-    uuua    GA     GU   U     AG  a     ---    u 
 gcug    ccGC  UUUGU  GGU UUGAU  Gg uaacc   aagg g
 ||||    ||||  |||||  ||| |||||  || |||||   ||||  
 cgau    GGUG  AGACG  CCA AGUUA  cc guugg   uucc u
u    -uac    --     AC   U     -a  -     aaa    c 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_238487: 85-175 [+]

Mature hpo-miR-10087-5p

• Accession: MIMAT0040737
• Description: Heligmosomoides polygyrus hpo-miR-10087-5p mature miRNA
• Sequence: 11 - GCGAUUUGUGUGGUUUUGAUAGG - 33
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10087-3p

• Accession: MIMAT0040738
• Description: Heligmosomoides polygyrus hpo-miR-10087-3p mature miRNA
• Sequence: 64 - AUUGAUACCCAGCAGAGUGG - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488