Stem-loop hpo-mir-10112

Accession

MI0032860

Description

Heligmosomoides polygyrus hpo-mir-10112 precursor miRNA

Sequence

cagacccuaacAGAAGGCCGUCCUUGGACAUGAuuagcgaauucUUGGGCAUGGAACUGCCUUCGAAaaaacgucuu
.((((.......((((((.((((.((..((.((.........)).))..)).)).)).))))))........)))).

Structure

c    -ccuaacA      C  -  U  GA  U  uua 
 agac        GAAGGC GU CC UG  CA GA   g
 ||||        |||||| || || ||  || ||   c
 ucug        CUUCCG CA GG AC  GU cu   g
u    caaaaAAG      U  A  U  GG  U  uaa 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_88012: 255-331 [+]

Mature hpo-miR-10112-5p

• Accession: MIMAT0040803
• Description: Heligmosomoides polygyrus hpo-miR-10112-5p mature miRNA
• Sequence: 12 - AGAAGGCCGUCCUUGGACAUGA - 33
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10112-3p

• Accession: MIMAT0040804
• Description: Heligmosomoides polygyrus hpo-miR-10112-3p mature miRNA
• Sequence: 45 - UUGGGCAUGGAACUGCCUUCGAA - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488