Stem-loop hpo-mir-10117

Accession

MI0032865

Description

Heligmosomoides polygyrus hpo-mir-10117 precursor miRNA

Sequence

AAGGUCUUGGCUGUAGCCACGGcuguuuugagaccGCGGACCAUUCAAGAUCAUC
..((((((((.((...((.(((((......)).))).))..)).))))))))...

Structure

-AA        C  UAG  A   -  gu 
   GGUCUUGG UG   CC CGG cu  u
   |||||||| ||   || ||| ||   
   CUAGAACU AC   GG Gcc ga  u
CUA        U  -CA  C   a  gu 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_267914: 250-304 [+]

Mature hpo-miR-10117-5p

• Accession: MIMAT0040813
• Description: Heligmosomoides polygyrus hpo-miR-10117-5p mature miRNA
• Sequence: 1 - AAGGUCUUGGCUGUAGCCACGG - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10117-3p

• Accession: MIMAT0040814
• Description: Heligmosomoides polygyrus hpo-miR-10117-3p mature miRNA
• Sequence: 36 - GCGGACCAUUCAAGAUCAUC - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488