Stem-loop hpo-mir-10127

Accession

MI0032875

Description

Heligmosomoides polygyrus hpo-mir-10127 precursor miRNA

Sequence

agggcgagcuGCGAGUGGGAAUAUGAAGCGUCugcugcgggggaugcagcguccucGACUUCAGGGAUCGACGCGCCGGaggcgccagg
..((((..(.(((.((.((....(((((((..(((((((.....)))))))....)).)))))....)).)).))).)....))))...

Structure

-ag    --ag u   A  G  AAUA     -  --UC       g 
   ggcg    c GCG GU GG    UGAAG CG    ugcugcg g
   ||||    | ||| || ||    ||||| ||    ||||||| g
   ccgc    G CGC CA CU    ACUUC Gc    gcgacgu g
gga    ggaG C   G  G  AGGG     A  uccu       a 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_46185: 3740-3828 [-]

Mature hpo-miR-10127-5p

• Accession: MIMAT0040833
• Description: Heligmosomoides polygyrus hpo-miR-10127-5p mature miRNA
• Sequence: 11 - GCGAGUGGGAAUAUGAAGCGUC - 32
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10127-3p

• Accession: MIMAT0040834
• Description: Heligmosomoides polygyrus hpo-miR-10127-3p mature miRNA
• Sequence: 57 - GACUUCAGGGAUCGACGCGCCGG - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488