Stem-loop hpo-mir-10133

Accession

MI0032881

Description

Heligmosomoides polygyrus hpo-mir-10133 precursor miRNA

Sequence

agagaggagcuaucgaagAGUGGCCAUGUGAUCGCGUGaugaugaaucuccuuauuaAACGGUGUGCUUUGGUUCUCUuccucuuguu
.((.(((((.....((((((.(((((.((.((((..((((((.((...)).))))))..))))..))..)))))))))))))))).))

Structure

a  g     cuauc      U     -U  -G    CG      u  a 
 ga aggag     gaagAG GGCCA  GU  AUCG  UGauga ga  
 || |||||     |||||| |||||  ||  ||||  |||||| || u
 uu uucuc     cuUCUC UUGGU  CG  UGGC  auuauu cu  
-  g     -----      -     UU  UG    AA      c  c 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_177516: 2061-2148 [+]

Mature hpo-miR-10133-5p

• Accession: MIMAT0040845
• Description: Heligmosomoides polygyrus hpo-miR-10133-5p mature miRNA
• Sequence: 19 - AGUGGCCAUGUGAUCGCGUG - 38
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10133-3p

• Accession: MIMAT0040846
• Description: Heligmosomoides polygyrus hpo-miR-10133-3p mature miRNA
• Sequence: 58 - AACGGUGUGCUUUGGUUCUCU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488