miRBase entry: hpo-mir-10158a

Stem-loop hpo-mir-10158a

Accession

MI0032909

Description

Heligmosomoides polygyrus hpo-mir-10158a precursor miRNA

Sequence

CUCCCGUCUCCUAGGCGUGUGUUgacaaacggcaaCACACUCCUUGGAGACGGGACCG
.((((((((((.(((.((((((((........)))))))).))).))))))))))...

Structure

--C          U   C        aca 
   UCCCGUCUCC AGG GUGUGUUg   a
   |||||||||| ||| ||||||||    
   AGGGCAGAGG UCC CACACaac   a
GCC          U   U        ggc

Annotation confidence Not enough data

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Genome context

HpolyGenome23022012_contig_92106: 499-556 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from hpo-mir-10158a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature hpo-miR-10158a-5p

Accession	MIMAT0040900
Description	Heligmosomoides polygyrus hpo-miR-10158a-5p mature miRNA
Sequence	1 - CUCCCGUCUCCUAGGCGUGUGUU - 23
Evidence	experimental Illumina [1]

Mature hpo-miR-10158a-3p

Accession	MIMAT0040901
Description	Heligmosomoides polygyrus hpo-miR-10158a-3p mature miRNA
Sequence	36 - CACACUCCUUGGAGACGGGACCG - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 25421927
Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
Nat Commun (2014) 5:5488