Stem-loop ptvpv2a-mir-P1

Accession

MI0033675

Description

Pan troglodytes verus polyomavirus 2a ptvpv2a-mir-P1 precursor miRNA

Sequence

ucacuUCUGGAAGAACCUCUAGGUACACugguuccguguuguGUGCUGGAUUCUCUUCCUGAAUugg
.((.(((.((((((...(((((.(((((............))))))))))...)))))).))).)).

Structure

u  c   U      ACC     G     ugguu 
 ca uUC GGAAGA   UCUAG UACAC     c
 || ||| ||||||   ||||| |||||      
 gu AAG CCUUCU   AGGUC GUGug     c
g  U   U      CUU     -     uugug 

Annotation confidence Not enough data

Genome context

Unknown

Mature ptvpv2a-miR-P1-5p

• Accession: MIMAT0041998
• Description: Pan troglodytes verus polyomavirus 2a ptvpv2a-miR-P1-5p mature miRNA
• Sequence: 6 - UCUGGAAGAACCUCUAGGUACAC - 28
• Evidence: experimental ; Illumina [1]

Mature ptvpv2a-miR-P1-3p

• Accession: MIMAT0041999
• Description: Pan troglodytes verus polyomavirus 2a ptvpv2a-miR-P1-3p mature miRNA
• Sequence: 43 - GUGCUGGAUUCUCUUCCUGAAU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25514573
   Identification of a polyomavirus microRNA highly expressed in tumors
   "Chen CJ, Cox JE, Azarm KD, Wylie KN, Woolard KD, Pesavento PA, Sullivan CS"
   "Virology (2015) 476:43-53