Stem-loop seu-MIR11023

Accession

MI0035686

Description

Salicornia europaea seu-MIR11023 precursor miRNA

Sequence

guuuucccuaUUUUACAUCGUUUACUUUGGGuaaaaaaaacaaaauguaaaaauuggguaaaaccucauuuuacacccuuuugaaaacauuuuuuccccaaauuugggagucaaaaguauuuuccgugcaaguaaccauugguaaauuucuaugaaaaugaguuuuccaugguaaaauguuuuucguggaaaacc
((((((((..((((((((.((((..(((......)))))))...))))))))...))).))))).(((((((..........(((((.((((((.(((((....)))).)..)))))).)))))((((.((((.(((...)))..)))).)))))))))))(((((((((((...........))))))))))).

Structure

-----------------------------------------------------------------------------------------------------------------------------------     -   -ua        --C    AC   GG 
                                                                                                                                   guuuu ccc   UUUUACAU   GUUU  UUU  G
                                                                                                                                   ||||| |||   ||||||||   ||||  |||   
                                                                                                                                   caaaa ggg   aaaaugua   caaa  aaa  u
ccaaaaggugcuuuuuguaaaaugguaccuuuugaguaaaaguaucuuuaaaugguuaccaaugaacgugccuuuuaugaaaacugaggguuuaaaccccuuuuuuacaaaaguuuucccacauuuuacuc     u   uua        aaa    --   aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature seu-miR11023

• Accession: MIMAT0043635
• Description: Salicornia europaea seu-miR11023 mature miRNA
• Sequence: 11 - UUUUACAUCGUUUACUUUGGG - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25848810
   High-throughput deep sequencing reveals that microRNAs play important roles in salt tolerance of euhalophyte Salicornia europaea
   Feng J, Wang J, Fan P, Jia W, Nie L, Jiang P, Chen X, Lv S, Wan L, Chang S, Li S, Li Y
   BMC Plant Biol (2015) 15:63