Stem-loop seu-MIR11035

Accession

MI0035700

Description

Salicornia europaea seu-MIR11035 precursor miRNA

Sequence

uuaugcgaccCGUUUUACCGAUCGUUUGGUuggguguguccuuagucgccccagagaagccauacccuuaagagguugagucgaaagacaaaggaaguagaaaaggcuggggcaaauaucuaaaucauuaaaaugcaucaaaaccaaauuuauccuuaaagugugucauucug
......(((.(((((((..(((.((((((((.(((((((..(((((.(((((((........(((((((..........(((....))).))))..))).......))))))).............))))).)))))))..))))))))..)))..))))))).)))......

Structure

uuaugc   c       CC   -C        -g       cc     ------------c       agaagcca   --    aagagguuga   g 
      gac CGUUUUA  GAU  GUUUGGUu  ggugugu  uuagu             gccccag        uac  ccuu          guc a
      ||| |||||||  |||  ||||||||  |||||||  |||||             |||||||        |||  ||||          |||  
      cug gugaaau  cua  uaaaccaa  cuacgua  aauua             cgggguc        aug  ggaa          cag a
gucuua   u       uc   uu        aa       -a     cuaaaucuauaaa       -ggaaaag   aa    ---------a   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature seu-miR11035

• Accession: MIMAT0043649
• Description: Salicornia europaea seu-miR11035 mature miRNA
• Sequence: 11 - CGUUUUACCGAUCGUUUGGU - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25848810
   High-throughput deep sequencing reveals that microRNAs play important roles in salt tolerance of euhalophyte Salicornia europaea
   Feng J, Wang J, Fan P, Jia W, Nie L, Jiang P, Chen X, Lv S, Wan L, Chang S, Li S, Li Y
   BMC Plant Biol (2015) 15:63