Stem-loop gmo-mir-27a-1

Accession

MI0036093

Description

Gadus morhua gmo-mir-27a-1 precursor miRNA

Sequence

agagcuuagcucauuagugagcaccgaggcaaacccuuuugUUCACAGUGGCUAAGUUCAGU
.(((((((((.((((.(((((((..((((.....)))).))))))))))))))))))))...

Structure

--a         u    a       cc    c 
   gagcuuagc cauu gugagca  gagg a
   ||||||||| |||| |||||||  |||| a
   CUUGAAUCG GUGA CACUUgu  uucc a
UGA         -    -       -u    c 

Annotation confidence Not enough data

Genome context

HE568747.1: 1327648-1327709 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from gmo-mir-27a-1

Mature gmo-miR-27a-3p

• Accession: MIMAT0044102
• Description: Gadus morhua gmo-miR-27a-3p mature miRNA
• Sequence: 42 - UUCACAGUGGCUAAGUUCAGU - 62
• Evidence: experimental ; SOLiD [1], Illumina [2]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305