miRBase entry: gmo-mir-24b

Stem-loop gmo-mir-24b

Accession

MI0036094

Description

Gadus morhua gmo-mir-24b precursor miRNA

Sequence

UGCCUACUGUACUGGAAUCAGUgugaccaugaaacuggcucaguccagcagggacagc
..(((.(((.(((((..(((((...........))))).))))).))).)))......

Structure

----UG   A   U     AA     guga 
      CCU CUG ACUGG  UCAGU    c
      ||| ||| |||||  |||||    c
      gga gac ugacu  gguca    a
cgacag   c   c     -c     aagu

Annotation confidence Not enough data

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Genome context

HE568747.1: 1326228-1326285 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from gmo-mir-24b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature gmo-miR-24b-5p

Accession	MIMAT0044174
Description	Gadus morhua gmo-miR-24b-5p mature miRNA
Sequence	1 - UGCCUACUGUACUGGAAUCAGU - 22
Evidence	experimental SOLiD [1]

References

PubMed ID: 25881242
Temperature during early development has long-term effects on microRNA expression in Atlantic cod
Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
BMC Genomics (2015) 16:305