miRBase entry: gmo-mir-10b

Stem-loop gmo-mir-10b


Accession
MI0036106
Description
Gadus morhua gmo-mir-10b precursor miRNA

Literature search
1 open access papers mention gmo-mir-10b
(1 sentences)

Sequence

UACCCUGUAGAACCGAAUGUGUggacaugcuucagcacagguuggguucugggggagu
...(((.(((((((.(((.((((............)))).))).))))))).)))...

Structure
UAC   G       G   G    gacau 
   CCU UAGAACC AAU UGUg     g
   ||| ||||||| ||| ||||      
   ggg gucuugg uug acac     c
uga   g       g   g    gacuu 


Annotation confidence Not enough data
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Genome context
HE566159.1: 65759-65816 [-]

Database links

Mature gmo-miR-10b-5p

Accession MIMAT0044188
Description Gadus morhua gmo-miR-10b-5p mature miRNA
Sequence 1 - UACCCUGUAGAACCGAAUGUGU - 22
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 25881242
    Temperature during early development has long-term effects on microRNA expression in Atlantic cod
    Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
    BMC Genomics (2015) 16:305