Stem-loop gmo-mir-181d

Accession

MI0036146

Description

Gadus morhua gmo-mir-181d precursor miRNA

Sequence

AACAUUCAUUGCUGUCGCUGGGUUggacuguguggaaaagcucacugaacaaugagugca
..(((((((((...(((.((((((...((....))...)))))).))).)))))))))..

Structure

AA         CUG   C      gga  g 
  CAUUCAUUG   UCG UGGGUU   cu u
  |||||||||   ||| ||||||   ||  
  gugaguaac   agu acucga   gg g
ac         --a   c      aaa  u 

Annotation confidence Not enough data

Genome context

HE568639.1: 560389-560448 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from gmo-mir-181d

Mature gmo-miR-181d-5p

• Accession: MIMAT0044234
• Description: Gadus morhua gmo-miR-181d-5p mature miRNA
• Sequence: 1 - AACAUUCAUUGCUGUCGCUGGGUU - 24
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305