miRBase entry: gmo-mir-11251

Stem-loop gmo-mir-11251


Accession
MI0036310
Description
Gadus morhua gmo-mir-11251 precursor miRNA


Sequence

agggagacauguuggagguacugugacaACAUCUCCACUUGUCUCCUUCU
.((((((((.((.(((((...(((....)))))))))).))))))))...

Structure
--a        u  u     uac   g 
   gggagaca gu ggagg   ugu a
   |||||||| || |||||   |||  
   UCCUCUGU CA CCUCU   ACA c
UCU        U  -     ---   a 


Annotation confidence Not enough data
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Genome context
CAEA01047452.1: 1834-1883 [+]

Database links

Mature gmo-miR-11251-3p

Accession MIMAT0044429
Description Gadus morhua gmo-miR-11251-3p mature miRNA
Sequence 29 - ACAUCUCCACUUGUCUCCUUCU - 50
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 25881242
    Temperature during early development has long-term effects on microRNA expression in Atlantic cod
    Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
    BMC Genomics (2015) 16:305