Stem-loop pla-MIR11609

Accession

MI0037341

Description

Paeonia lactiflora pla-MIR11609 precursor miRNA

Literature search

1 open access papers mention pla-MIR11609
(2 sentences)

Sequence

aagccuuaugUAGCUUGGUGUGAGGUCAACUUugaaccuuuuuuccuagacuuuuagagccugaaguugugagucaacgaaagaccuucaaucuuggagguacaaaucuuuugucaugagcauuugaagaacuaaauaucauaguguacuugcacacccagauguaaaagagggcuuc
(((((((......((.((((((((((..(((.(((.....(((((...(((((....(((.....)))..)))))...)))))(((((((....))))))).((((((((.......))).)))))............))).)))..)))).)))))).)).........))))))).

Structure

-       ---augUAG  U      -    CA   U   --------------------------------------------------accuu     cua     uuag   c 
 aagccuu         CU GGUGUG AGGU  ACU uga                                                       uuuuc   gacuu    agc u
 |||||||         || |||||| ||||  ||| |||                                                       |||||   |||||    ||| g
 uucggga         ga ccacac uuca  uga acu                                                       gaaag   cugag    uug a
c       gaaaaugua  c      g    ug   u   auaaaucaagaaguuuacgaguacuguuuucuaaacauggagguucuaacuucca     caa     --ug   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature pla-miR11609

• Accession: MIMAT0045462
• Description: Paeonia lactiflora pla-miR11609 mature miRNA
• Sequence: 11 - UAGCUUGGUGUGAGGUCAACUU - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26393656
   Identification of miRNAs Responsive to Botrytis cinerea in Herbaceous Peony (Paeonia lactiflora Pall.) by High-Throughput Sequencing
   Zhao D, Gong S, Hao Z, Tao J
   Genes (Basel) (2015) 6:918-934