Stem-loop cpo-mir-30d

Accession

MI0038594

Description

Cavia porcellus cpo-mir-30d precursor miRNA

Sequence

UGUAAACAUCCCCGACUGGAAGCUguacaacacagcugagCUUUCAGUCAGAUGUUUGCUGC
.(((((((((...(((((((((((..............))))))))))).)))))))))...

Structure

--U         CCC           guacaa 
   GUAAACAUC   GACUGGAAGCU      c
   |||||||||   |||||||||||       
   CGUUUGUAG   CUGACUUUCga      a
CGU         --A           gucgac 

Annotation confidence Not enough data

Genome context

DS562906.1: 2020362-2020423 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-30d

Mature cpo-miR-30d-5p

• Accession: MIMAT0046910
• Description: Cavia porcellus cpo-miR-30d-5p mature miRNA
• Sequence: 1 - UGUAAACAUCCCCGACUGGAAGCU - 24
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-30d-3p

• Accession: MIMAT0046911
• Description: Cavia porcellus cpo-miR-30d-3p mature miRNA
• Sequence: 41 - CUUUCAGUCAGAUGUUUGCUGC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344