Stem-loop cpo-mir-105

Accession

MI0038617

Description

Cavia porcellus cpo-mir-105 precursor miRNA

Sequence

UCAAAUGCUCAGACUCCUGUGGUGgcugcuuaugcaCCACGGAUGUUUGAGCAUGUGCU
.((.((((((((((..((((((((..........))))))))..)))))))))).))..

Structure

-U  A          UC        gcug 
  CA AUGCUCAGAC  CUGUGGUG    c
  || ||||||||||  ||||||||     
  GU UACGAGUUUG  GGCACCac    u
UC  G          UA        guau 

Annotation confidence Not enough data

Genome context

DS563052.1: 745545-745603 [+]

Mature cpo-miR-105-5p

• Accession: MIMAT0046953
• Description: Cavia porcellus cpo-miR-105-5p mature miRNA
• Sequence: 1 - UCAAAUGCUCAGACUCCUGUGGUG - 24
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-105-3p

• Accession: MIMAT0046954
• Description: Cavia porcellus cpo-miR-105-3p mature miRNA
• Sequence: 37 - CCACGGAUGUUUGAGCAUGUGCU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344